Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863778.1_cds_XP_016515782.1_28092
CDS Infomation

[gene=LOC107832451] [db_xref=GeneID:107832451] [protein=CBS domain-containing protein CBSCBSPB1-like] [protein_id=XP_016515782.1] [location=complement(join(9975..10157,10330..10419,10528..10613,11186..11319,11407..11513,12503..12561,12646..12751,12958..13024,13133..13246,13338..13419,13575..13745,13822..13954,14117..14285,16267..16418))] [gbkey=CDS]
Sequence

ATGCCGACGAGTCAAGGAGGAGGATCATCGTCGAGGAGAAGCATGTCGTTGACGAGCTCT
TCGTCTCTCGTTAAGAAGAAAGCAGCCACCGAAAATGGAGGAGCGCAACCTGATTCCGCT
CACCGGAAGTCCATTTCTTCATCTCGTAACATGGGACTGACTGGAGAGCGCACAGTGAAG
AGACTGCGGCTATCAAAAGCCCTAACAGTACCTGATACTACAAGTATTTATGAAGCTTGC
CGCAAGATGGCTGCTCGCCGAGTTGATGCTTTATTGTTGACTGATTCAAATGCATTACTA
TGTGGTATCCTGACGGATAAGGATATAGCAACAAGGGTTATTGCTCAAGAAGTTAATATA
CAGGAAACACCTGTTTCAAAGATTATGACGAAAAATCCTGTTTTTGTGCTTTCTGACACA
CTTGCTGTGGAGGCTTTGCAGAAAATGGTGCTAGGAAAATTTAGACATTTGCCAGTTGTA
GAAAATGGAGAGGTCGTTGCTTTGCTTGATATAGCAAAATGCCTTTATGATGCAATTGCT
CGCCTCGAAAGGGCAGCTGAGAAAGGAAAGGCCATTGCAGCTGCTGTTGAGGGAGTTGAA
AAACACTGGGGGACATCTGGTTCTGCAAGTTCTAATACATTTATAGAAACACTTCGGGAG
CAAATGTTCAGGCCTTCACTGTCTACCATCATTTCTGAAAATTCAAAGATTGTTACAGTT
GAACCAAGTGATACTGTGTTAGCCACAGCAAAAAAAATGCTCGAATGTCGAACAAGCTCT
GCAATTGTAACAGTTGACAACAAACCACGAGGGATTTTAACTTCAAAGGACTTATTGATG
CGAGTCATGGCACAAGATCTTTCCCCTGAGTCCACTCTCGTAGAGAAGGTAATGACGCCC
AATCCAGAATGTGCTTCAATAGATATGCCAATTGTTGATGCTTTACATACAATGCATGAT
GGGAAATTTTTGCACCTTCCTGTAGTTGATAAAGAGGGAATTGTTGTTGCTGTTCTTGAT
GTGCTTCATATCACTCATGCAGCTGTAGCCACGGTGGGAAATACTGCTGGAATAAATAAT
GAAGCTGCAAACTCTATGATGCAAAGATTTTGGGATTCAGCTATGGCATTGACTCCGGAT
GATGATGAAGAGACGCGGAGTGACAGTTCCTTGAAATTGGCTTCTGAAGGGGCAGAAACA
GGAAGATCTATTCCCTATCCTTCATCGAGCCAGCCAAATAGTTTTTCATTCAAGATTGAA
GACAAAAAGGGAAGAATGCACAGATTCAATTGTGATATTCGGAACATGACAGATCTTATA
GCTGCAATCATTCAGAGAGTGGGGGATGACATTGACCGGGACAATCTTCCTCAGATTCTG
TATGAAGATGAAGATCATGACAAGGTTGTATTAGCATCAGATAGTGATCTTACAGCAGCT
GTTGACCATGCAAGATCTGCAGGTTGGAAGGGGCTGAAATTGCATTTAGACTATTCAGGA
ATAACTGGCCATCGAAGGGGTTCAAGCTCCAGTAGTTTGGATTATGCTCATACAGAATCT
GCTTGGGCTTCAGCCTACAGCACTGTAGCAGCCGGTGCTGCATTAGTTGCAGGTTTAGGC
GTACTAGCATTCTTAAGGAGATCTGGTAACTGA

Peptide Sequence

PEP ID

XP_016515782.1
PEP Infomation

PREDICTED: CBS domain-containing protein CBSCBSPB1-like [Nicotiana tabacum]
Sequence

MPTSQGGGSSSRRSMSLTSSSSLVKKKAATENGGAQPDSAHRKSISSSRNMGLTGERTVK
RLRLSKALTVPDTTSIYEACRKMAARRVDALLLTDSNALLCGILTDKDIATRVIAQEVNI
QETPVSKIMTKNPVFVLSDTLAVEALQKMVLGKFRHLPVVENGEVVALLDIAKCLYDAIA
RLERAAEKGKAIAAAVEGVEKHWGTSGSASSNTFIETLREQMFRPSLSTIISENSKIVTV
EPSDTVLATAKKMLECRTSSAIVTVDNKPRGILTSKDLLMRVMAQDLSPESTLVEKVMTP
NPECASIDMPIVDALHTMHDGKFLHLPVVDKEGIVVAVLDVLHITHAAVATVGNTAGINN
EAANSMMQRFWDSAMALTPDDDEETRSDSSLKLASEGAETGRSIPYPSSSQPNSFSFKIE
DKKGRMHRFNCDIRNMTDLIAAIIQRVGDDIDRDNLPQILYEDEDHDKVVLASDSDLTAA
VDHARSAGWKGLKLHLDYSGITGHRRGSSSSSLDYAHTESAWASAYSTVAAGAALVAGLG
VLAFLRRSGN

Transcript Sequence

Gene sequence data has not been registered.